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Agent skills
openclaw-skills

Topic: openclaw-skills

1,539 skills in this topic.

bio-workflows-clip-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
zarr-python Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-metabolomics-statistical-analysis Statistical analysis for metabolomics data. Covers univariate testing, multivariate methods (PCA, PLS-DA), and biomarker discovery. Use when identifying differentially abundant metabolites or building classification models.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-genome-assembly-hifi-assembly
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-metagenomics-visualization Visualize metagenomic profiles using R (phyloseq, microbiome) and Python (matplotlib, seaborn). Create stacked bar plots, heatmaps, PCA plots, and diversity analyses. Use when creating publication-quality figures from MetaPhlAn, Bracken, or other taxonomic profiling output.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-phasing-imputation-imputation-qc
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
pymc-bayesian-modeling Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic programming and inference.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
uniprot-database Direct REST API access to UniProt. Protein searches, FASTA retrieval, ID mapping, Swiss-Prot/TrEMBL. For Python workflows with multiple databases, prefer bioservices (unified interface to 40+ services). Use this for direct HTTP/REST work or UniProt-specific control.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-clinical-databases-somatic-signatures Extract and analyze mutational signatures from somatic variants using SigProfiler or MutationalPatterns to characterize mutagenic processes. Use when identifying DNA damage mechanisms or etiology in cancer genomes.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tcr-pmhc-prediction-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-clinical-trial-matching AI-driven patient-to-trial matching for precision medicine and oncology. Given a patient profile (disease, molecular alterations, stage, prior treatments), discovers and ranks clinical trials from ClinicalTrials.gov using multi-dimensional matching across molecular eligibility, clinical criteria, drug-biomarker alignment, evidence strength, and geographic feasibility. Produces a quantitative Trial Match Score (0-100) per trial with tiered recommendations and a comprehensive markdown report. Use when oncologists, molecular tumor boards, or patients ask about clinical trial options for specific cancer types, biomarker profiles, or post-progression scenarios.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tcr-repertoire-analysis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-workflows-merip-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
long-read-sequencing-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
agent-browser Browse the web for any task — research topics, read articles, interact with web apps, fill forms, take screenshots, extract data, and test web pages. Use whenever a browser would be useful, not just when the user explicitly asks.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-local-blast
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
tooluniverse-cancer-variant-interpretation Provide comprehensive clinical interpretation of somatic mutations in cancer. Given a gene symbol + variant (e.g., EGFR L858R, BRAF V600E) and optional cancer type, performs multi-database analysis covering clinical evidence (CIViC), mutation prevalence (cBioPortal), therapeutic associations (OpenTargets, ChEMBL, FDA), resistance mechanisms, clinical trials, prognostic impact, and pathway context. Generates an evidence-graded markdown report with actionable recommendations for precision oncology. Use when oncologists, molecular tumor boards, or researchers ask about treatment options for specific cancer mutations, resistance mechanisms, or clinical trial matching.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-longread-structural-variants Detect structural variants from long-read alignments using Sniffles, cuteSV, and SVIM. Use when detecting deletions, insertions, inversions, translocations, or complex rearrangements from ONT or PacBio data, especially those missed by short-read methods.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-hi-c-analysis-contact-pairs Process Hi-C read pairs using pairtools. Parse alignments, filter duplicates, classify pairs, and generate contact statistics from Hi-C sequencing data. Use when processing raw Hi-C read pairs.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-vcf-statistics Generate variant statistics, sample concordance, and quality metrics using bcftools stats and gtcheck. Use when evaluating variant quality, comparing samples, or summarizing VCF contents.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
pubmed-search Search PubMed for scientific literature. Use when the user asks to find papers, search literature, look up research, find publications, or asks about recent studies. Triggers on "pubmed", "papers", "literature", "publications", "research on", "studies about".
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
pdb Fetch and analyze protein structures from RCSB PDB. Use this skill when: (1) Need to download a structure by PDB ID, (2) Search for similar structures, (3) Prepare target for binder design, (4) Extract specific chains or domains, (5) Get structure metadata. For sequence lookup, use uniprot. For binder design workflow, use binder-design.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
molfeat Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
bio-alignment-indexing
FreedomIntelligence/OpenClaw-Medical-Skills 2,009