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Topic: mcp

13,395 skills in this topic.

diffdock Diffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based drug design. Not for affinity prediction.
foryourhealth111-pixel/Vibe-Skills 1,415
imagegen Use when the user asks to generate or edit images via the OpenAI Image API (for example: generate image, edit/inpaint/mask, background removal or replacement, transparent background, product shots, concept art, covers, or batch variants); run the bundled CLI (`scripts/image_gen.py`) and require `OPENAI_API_KEY` for live calls.
foryourhealth111-pixel/Vibe-Skills 1,415
dnanexus-integration DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.
foryourhealth111-pixel/Vibe-Skills 1,415
clinpgx-database Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.
foryourhealth111-pixel/Vibe-Skills 1,415
deeptools NGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.
foryourhealth111-pixel/Vibe-Skills 1,415
docx Document toolkit (.docx). Create/edit documents, tracked changes, comments, formatting preservation, text extraction, for professional document processing.
foryourhealth111-pixel/Vibe-Skills 1,415
clinicaltrials-database Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.
foryourhealth111-pixel/Vibe-Skills 1,415
pdf PDF manipulation toolkit. Extract text/tables, create PDFs, merge/split, fill forms, for programmatic document processing and analysis.
foryourhealth111-pixel/Vibe-Skills 1,415
pptx Presentation toolkit (.pptx). Create/edit slides, layouts, content, speaker notes, comments, for programmatic presentation creation and modification.
foryourhealth111-pixel/Vibe-Skills 1,415
neuropixels-analysis Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Use when working with neural recordings, spike sorting, extracellular electrophysiology, or when the user mentions Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, or unit curation.
foryourhealth111-pixel/Vibe-Skills 1,415
docx-comment-reply Reply to comments (批注) in Word .docx/.doc files: extract comment context, draft replies, write threaded replies back, and validate OOXML.
foryourhealth111-pixel/Vibe-Skills 1,415
metric-calculator Metric Calculator - Auto-activating skill for Data Analytics. Triggers on: metric calculator, metric calculator Part of the Data Analytics skill category.
foryourhealth111-pixel/Vibe-Skills 1,415
netlify-deploy Deploy web projects to Netlify using the Netlify CLI (`npx netlify`). Use when the user asks to deploy, host, publish, or link a site/repo on Netlify, including preview and production deploys.
foryourhealth111-pixel/Vibe-Skills 1,415
molfeat Molecular featurization for ML (100+ featurizers). ECFP, MACCS, descriptors, pretrained models (ChemBERTa), convert SMILES to features, for QSAR and molecular ML.
foryourhealth111-pixel/Vibe-Skills 1,415
adaptyv Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing protein design workflows with wet-lab validation.
foryourhealth111-pixel/Vibe-Skills 1,415
ml-data-leakage-guard Detects and prevents data leakage in machine learning and mathematical modeling. Auto-activates after ML tasks involving: data cleaning, feature engineering, data augmentation, algorithm development, normalization, missing value imputation, dimensionality reduction, feature selection, time series modeling. Checks if features/statistics would be available at prediction time.
foryourhealth111-pixel/Vibe-Skills 1,415
performing-regression-analysis Execute this skill empowers AI assistant to perform regression analysis and modeling using the regression-analysis-tool plugin. it analyzes datasets, generates appropriate regression models (linear, polynomial, etc.), validates the models, and provides performa... Use when analyzing code or data. Trigger with phrases like 'analyze', 'review', or 'examine'.
foryourhealth111-pixel/Vibe-Skills 1,415
markdown-mermaid-writing Comprehensive markdown and Mermaid diagram writing skill that establishes text-based diagrams as the DEFAULT documentation standard. Use this skill when creating ANY scientific document, report, analysis, or visualization — it ensures all outputs are in version-controlled, token-efficient markdown with embedded Mermaid diagrams as the source of truth, with clear pathways to downstream Python or AI-generated images. Includes full style guides (markdown + mermaid), 24 diagram type references, and 9 document templates ready to use.
foryourhealth111-pixel/Vibe-Skills 1,415
market-research-reports Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, deep integration with research-lookup for data gathering, and multi-framework strategic analysis including Porter Five Forces, PESTLE, SWOT, TAM/SAM/SOM, and BCG Matrix.
foryourhealth111-pixel/Vibe-Skills 1,415
local-vco-roles Codex-local role pack for dialectic multi-agent reviews, designed to be compatible with the local vibe skill.
foryourhealth111-pixel/Vibe-Skills 1,415
markitdown Convert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.
foryourhealth111-pixel/Vibe-Skills 1,415
modal Run Python code in the cloud with serverless containers, GPUs, and autoscaling. Use when deploying ML models, running batch processing jobs, scheduling compute-intensive tasks, or serving APIs that require GPU acceleration or dynamic scaling.
foryourhealth111-pixel/Vibe-Skills 1,415
math-model-selector Routes problems to appropriate mathematical frameworks using expert heuristics
foryourhealth111-pixel/Vibe-Skills 1,415
medchem Medicinal chemistry filters. Apply drug-likeness rules (Lipinski, Veber), PAINS filters, structural alerts, complexity metrics, for compound prioritization and library filtering.
foryourhealth111-pixel/Vibe-Skills 1,415