Topic: claude-code
35,830 skills in this topic.
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data-stats-analysis
Perform statistical tests, hypothesis testing, correlation analysis, and multiple testing corrections using scipy and statsmodels. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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hipaa-compliance
Ensure HIPAA compliance when handling PHI (Protected Health Information). Use when writing code that accesses user health data, check-ins, journal entries, or any sensitive information. Activates for audit logging, data access, security events, and compliance questions.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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cbioportal-database
Query cBioPortal for cancer genomics data including somatic mutations, copy number alterations, gene expression, and survival data across hundreds of cancer studies. Essential for cancer target validation, oncogene/tumor suppressor analysis, and patient-level genomic profiling.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-workflows-cnv-pipeline
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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organoid-drug-response-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-crispr-screens-mageck-analysis
MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout) for pooled CRISPR screen analysis. Covers count normalization, gene ranking, and pathway analysis. Use when identifying essential genes, drug targets, or resistance mechanisms from dropout or enrichment screens.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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proteinmpnn
Design protein sequences using ProteinMPNN inverse folding. Use this skill when: (1) Designing sequences for RFdiffusion backbones, (2) Redesigning existing protein sequences, (3) Fixing specific residues while designing others, (4) Optimizing sequences for expression or stability, (5) Multi-state or negative design.
For backbone generation, use rfdiffusion or bindcraft. For ligand-aware design, use ligandmpnn. For solubility optimization, use solublempnn.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-variant-normalization
Normalize indel representation and split multiallelic variants using bcftools norm. Use when comparing variants from different callers or preparing VCF for downstream analysis.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-methylation-based-detection
Analyzes cfDNA methylation patterns for cancer detection using cfMeDIP-seq or bisulfite sequencing with MethylDackel. Identifies cancer-specific methylation signatures and performs tissue-of-origin deconvolution. Use when using methylation biomarkers for early cancer detection or minimal residual disease.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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research-lookup
Look up current research information using Perplexity's Sonar Pro Search or Sonar Reasoning Pro models through OpenRouter. Automatically selects the best model based on query complexity. Search academic papers, recent studies, technical documentation, and general research information with citations.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-longread-medaka
Polish assemblies and call variants from Oxford Nanopore data using medaka. Uses neural networks trained on specific basecaller versions. Use when improving ONT-only assemblies or calling variants from Nanopore data without short-read polishing.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-hi-c-analysis-matrix-operations
Balance, normalize, and transform Hi-C contact matrices using cooler and cooltools. Apply iterative correction (ICE), compute expected values, and generate observed/expected matrices. Use when normalizing or transforming Hi-C matrices.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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research-literature
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-systems-biology-metabolic-reconstruction
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-proteomics-proteomics-qc
Quality control and assessment for proteomics data. Use when evaluating proteomics data quality before downstream analysis. Covers sample metrics, missing value patterns, replicate correlation, batch effects, and intensity distributions.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-longread-qc
Quality control for long-read sequencing data using NanoPlot, NanoStat, and chopper. Generate QC reports, filter reads by length and quality, and visualize read characteristics. Use when assessing ONT or PacBio run quality or filtering reads before assembly or alignment.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-reporting-automated-qc-reports
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-ribo-seq-riboseq-preprocessing
Preprocess ribosome profiling data including adapter trimming, size selection, rRNA removal, and alignment. Use when preparing Ribo-seq reads for downstream analysis of translation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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benchling-integration
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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coagulation-thrombosis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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chemist-analyst
Analyzes events through chemistry lens using molecular structure, reaction mechanisms, thermodynamics,
kinetics, and analytical techniques (spectroscopy, chromatography, mass spectrometry).
Provides insights on chemical processes, material properties, reaction pathways, synthesis, and analytical methods.
Use when: Chemical reactions, material analysis, synthesis planning, process optimization, environmental chemistry.
Evaluates: Molecular structure, reaction mechanisms, yield, selectivity, safety, environmental impact.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-tcr-bcr-analysis-mixcr-analysis
Perform V(D)J alignment and clonotype assembly from TCR-seq or BCR-seq data using MiXCR. Use when processing raw immune repertoire sequencing data to identify clonotypes and their frequencies.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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chip-clonal-hematopoiesis-agent
FreedomIntelligence/OpenClaw-Medical-Skills 2,009
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bio-metagenomics-strain-tracking
Track bacterial strains using MASH, sourmash, fastANI, and inStrain. Compare genomes, detect contamination, and monitor strain-level variation. Use when needing sub-species resolution for outbreak tracking, transmission analysis, or within-host strain dynamics.
FreedomIntelligence/OpenClaw-Medical-Skills 2,009