Agent skill

scientific-writing

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Install this agent skill to your Project

npx add-skill https://github.com/drshailesh88/integrated_content_OS/tree/main/skills/cardiology/scientific-writing

SKILL.md

Scientific Writing

Core skill for producing research manuscripts, evidence-based articles, and publication-quality scientific content with rigorous standards.

Triggers

  • User asks to write a research-style article
  • User needs IMRAD-structured content
  • User wants to write for a scientific audience
  • User is drafting content requiring citations and methodology
  • User needs to follow reporting guidelines (CONSORT, STROBE, PRISMA)

Two-Stage Writing Process

Stage 1: Outline with Research

  1. Create section outlines with bullet points
  2. Use pubmed-database skill for literature gathering
  3. Identify key citations for each point
  4. Structure evidence hierarchy

Stage 2: Convert to Prose

Critical: Always write in full paragraphs with flowing prose. Never submit bullet points in the final manuscript.

IMRAD Structure

Section Purpose Key Elements
Introduction Why this matters Background, gap, objective
Methods What you did Design, population, analysis
Results What you found Data, statistics, figures
Discussion What it means Interpretation, limitations, implications

Reporting Guidelines

For Different Study Types

Study Type Guideline Checklist Items
RCTs CONSORT Randomization, blinding, flow diagram
Observational STROBE Selection, bias assessment, confounders
Systematic reviews PRISMA Search strategy, screening, synthesis
Diagnostic studies STARD Index test, reference standard, flow
Case reports CARE Timeline, diagnostic reasoning, outcomes

Citation Standards

Supported Styles

  • AMA - Medical journals (JAMA, NEJM)
  • Vancouver - Numbered citations
  • APA - Psychology, behavioral science
  • Nature - Superscript numbered
  • IEEE - Engineering/technical

Citation Best Practices

  1. Cite primary sources, not reviews (unless reviewing)
  2. Include DOI when available
  3. Verify accuracy with citation-management skill
  4. Prefer recent publications (<5 years) when current evidence exists
  5. Include seminal papers for historical context

Field-Specific Conventions

Cardiology/Medicine

  • Report confidence intervals, not just p-values
  • Include NNT/NNH for clinical relevance
  • Use GRADE for evidence quality
  • Specify intention-to-treat vs per-protocol
  • Report absolute and relative risk

Statistical Reporting

  • Mean (SD) for normal distributions
  • Median (IQR) for skewed data
  • HR with 95% CI for survival analysis
  • OR/RR with 95% CI for binary outcomes
  • Specify statistical tests used

Common Rejection Reasons (Avoid These)

  1. Inadequate statistical descriptions - Always specify tests, assumptions, software
  2. Over-interpretation of results - Stay within what data supports
  3. Poorly described methods - Replicability is essential
  4. Missing reporting checklist items - Use appropriate guidelines
  5. Weak literature contextualization - Show how work fits existing knowledge

Quality Checklist

Before finalizing scientific content:

  • All claims have citations
  • Statistics include effect sizes and CIs
  • Methods are replicable
  • Limitations acknowledged
  • Conclusions match evidence strength
  • No AI tells or promotional language

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